miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|66272432|gb|DR008288.1|DR008288 ATCATTTTATTTCCCGTCAGCCCATATTTTTCCAGATTAAAATCAAATTAACGAGAAAATCCAAAGTCGACCGAATCGTT
AAAATAATATTACAGATGTTTATTATCTACTTTAGAATTGTTTTTTAAATCCAATTTAGAACCCAAATTTAGTCTTCATC
GGTGCAGATAATAATTTTATGTCCCTCGAGCAGAAAACAGAATATCCAATCTATCGGACGAGAGATGCTTCAGTTGTTGG
CAGTTAGTCGCTGTCGCTATCACTGCTGCTGCTGCTGCTGCTGCTACTGCTGCTGCTGCTGGAATCCGAGTCGGTAATCA
GCTTGCCCTTGAGGGTCTCCTGGTCGAAGATGTATTCACCCAACTTCGTTGTGCATTTCTTCAGGATGGTCACATACTTG
CCGAGCTTCTTGATCACAATAACCTGCTTGCAAATGTAGTCGTTCACCCGTTTCTCCATATGTGGATCCGCGTACTTGAT
GCACAATTTGTGCAACTCATGCAGATTCTCGATCAGGTTCTTCTGCAGGTCCAGAGCAAACAGCATTGCATCCACGCCGT
TTCCCCAAGTACGAACACTCGGTTTCTTAATGTCAAAAAGAACAACGCGACCACCACGCCTGTTCATGATCTTGCCCAGT
TCCAAGGCACATCCCAGCTCCACATCGGCGCAATCCATGAAGAACTTGGAGAATCCAGGCAGAGCAGCATCGCAACTATC
GAAGTGGAACGACATGGACCGGTACGTGTAA




Most similar to sp|P42577|FRIS_LYMST

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P42577|FRIS_LYMST Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2
          Length = 174

 Score =  127 bits (319), Expect = 8e-29
 Identities = 67/141 (47%), Positives = 96/141 (68%), Gaps = 1/141 (0%)
 Frame = -2

Query: 750 YTYRSMSFHFDSCDAALPGFSKFFMDCADVELGCALELGKIMNRRGGRVVLFDIKKPSVR 571
           Y+Y+SM+++FD  D ALPGF KFF   ++ E   A +L K  N+RGGR+VL DIKKP   
Sbjct: 30  YSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKPDRD 89

Query: 570 TWGNGVDAMLFALDLQKNLIENLHELHKLCIKYADPHMEKRV-NDYICKQVIVIKKLGKY 394
            WG G++AM  AL L+K++ ++L +LHKLC  + D  M   + ++++ +QV  IK+L  Y
Sbjct: 90  EWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKELSDY 149

Query: 393 VTILKKCTTKLGEYIFDQETL 331
           +T LK+    LGEYIFD+ETL
Sbjct: 150 ITNLKRVGPGLGEYIFDKETL 170